Research Group
Wong CL Catherine
Tel:  021-20778066
His/Her Lab

Selected Publications

1. Wong, C. C., Cociorva, D., Miller, C. A., Schmidt, A., Monell, C., Aebersold, R., and Yates 3rd, J. R., Proteomics of Pyrococcus Furiosus (PFU): Identification of Extracted Proteins by Three Independent Methods, J Proteome Res. 2013, 12(2), 763-70.
2. Ozcan L., Wong, C. C., Li, G., Xu, T., Pajvani, U., Park, S. K., Wronska, A., Chen, B. X., Marks, A. R., Fukamizu, A., Backs, J., Singer, H. A., Yates 3rd, J. R., Accili, D., and Tabas, I., Calcium Signaling Through CaMKII Regulates Hepatic Glucose Production in Fasting and Obesity, Cell Metab. 2012, 15(5), 739-51.
3. Wang, Y. J., Fonslow, B. R., Wong, C. C., Nakorchevsky, A., and Yates 3rd, J. R., Improving the Comprehensiveness and Sensitivity of Sheathless Capillary Electrophoresis-Tandem Mass Spectrometry for Proteomic Analysis, Anal. Chem. 2012, 84, 8505-13.
4. Fonslow, B. R., Niessen, S. M., Singh, M., Wong, C. C., Xu, T., Carvalho, P. C., Choi, J., Park, S. K., and Yates 3rd, J. R., Single-step Inline Hydroxyapatite Enrichment Facilitates Identification and Quantitation of Phosphopeptides from Mass-limited Proteomes with MudPIT, J Proteome Res 2012, 11(5), 2697-709.
Saha, S., Wong, C. C., Xu, T., Zebroski, H., Yates 3rd, J. R., and Kashina, A., Arginylation and Methylation Double Up to Regulate Nuclear Proteins and Nuclear Architecture in vivo, Chemistry & Biology, 2011, 23, 1369-78.
5. Peng, Y., Wong, C. C., Nakajima, Y., Tyers, R., Sarkeshik, A., Yates 3rd, J. R., Drubin, D. G., and Barnes, G., Overlapping Kinetochore Targets of CK2 and Aurora B Kinases in Mitotic Regulation, MBoC., 2011, 22, 2680-89.
6. Lauwaet, T., Reiner, D. D., Romijin, E. P., Wong, C. C., Skarin, H., Davids, B. J., Svard, S. G., McArthur, A. G., Yates 3rd, J. R., and Gillin, F. D., Mining the Giardia Genome and Proteome for conserved and unique basal body proteins, Int J for Parasitology, 2011, 41(10), 1079-92.
7. Keck, J. M., Jones, M. H., Wong, C. C., Binkley, J., Chen, D., Holinger, E. P., Niepel, M., Rout, M., Vogel, J., Sidow, A., Yates 3rd, J. R., and Winey, M., A Cell Cycle Phosphoproteome of the Yeast Centrosome, Science, 2011, 332, 1557-61.
8. Jones, M. H., Keck, J. M., Wong, C. C., Xu, T., Yates 3rd, J. R., and Winey, M., Cell Cycle Phosphorylation of Mitotic Exit Network (MEN) Proteins, Cell Cycle, 2011, 10:20, 3435-40.
9. Nakamura, T., Wang, L., Wong, C. C., Scott, F. L., Eckelman, B. P., Han, X., Tzitzilonis, C., Clemente, A. T., Okamoto, s., Salvesen, G. S., Riek, R., Yates 3rd, J. R., and Lipton, S. A., S-Nitrosylation of XIAP Regulates Caspase-Dependent Neuronal Cell Death, Mol Cell, 2010, 39, 184-195.
10. Diao, Y., Liu, W., Wong, C. C., Pan, L., Lee, K., Cheung, P., Yates 3rd, J. R., Han, J., Zhang, M., and Wu, Z., An Oxidation-Induced Intramolecular Disulfide Bond Inactivates MKK6 by Inhibiting ATP Binding, PNAS, 2010, 107, 20974-79.
11. Chan, D. S. H., Lee, H. M., Yang, F., Che, C. M., Wong, C. C., Ruben, A., Leung, C. H., and Ma, D. L., Structure-Based Discovery of Natural-Product-like TNF-a Inhibitors, Angew Chem Int Ed. 2010, 49, 2860-64.
Nakajima, Y., Tyers, R. G., Wong, C. C., Yates 3rd, J. R., Drubin, D. G., and Barnes, G., Nbl1p: A Borealin/Dasra/CSC-1-like Protein Essential for Aurora/lpl1 Complex Function and Integrity in Saccharomyces Cerevisiae, Mol Biol Cell, 2009, 20, 1772-84.
12. Wong, C. C., Cociorva, D., Venable, J. D., Xu, T., and Yates 3rd, J. R., Comparison of Different Signal Thresholds on Data Dependent Sampling in Orbitrap and LTQ Mass Spectrometry for the Identification of Peptides and Proteins in Complex Mixtures, J Am Soc Mass Spectrom., 2009, 20, 1405-14.
Xu, T.*, Wong, C. C.* (co-first Author), Kashina, A., and Yates 3rd, J. R., Identification of N-terminally Arginylated Proteins and Peptides by Mass Spectrometry, Nat Protoc., 2009, 4, 325-32.
13. Carvalho, P. C., Cociorva, D., Wong, C. C., Carvalho, M. D., Barbosa, V. C., and Yates 3rd, J. R., Charge Prediction Machine: Tool for Inferring Precursor Charge States of Electron Transfer Dissociation Tandem Mass Spectra, Anal Chem., 2009, 81, 1996-2003.
14. Bell, A. W., Deutsch, E. W., Au, C. E., Kearney, R. E., Beavis, R., Sechi, S., Nilsson, T., Bergeron, J. J., Beardslee, T. A., Chappell, T., Meredith, G., Sheffield, P., Gray, P., Hajivandi, M., Pope, M., Predki, P., Kullolli, M., Hincapie, M., Hancock, W. S., Jia, W., Song, L., Li, L., Wei, J., Yang, B., Wang, J., Ying, W., Zhang, Y., Cai, Y., Qian, X., He, F., Meyer, H. E., Stephan, C., Eisenacher, M., Marcus, K., Langenfeld, E., May, C., Carr, S. A., Ahmad, R., Zhu, W., Smith, J. W., Hanahs, S. M., Struthers, J. J., Wang, H., Zhang, Q., An, A., Goldman, R., Carlsohn, E., Post, S. V. E., Hung, K. E., Sarracino, D. A., Parker, K., Krastins, B., Kucherlapati, R., Bourassa, S., Poirier, G. G., Kapp, E., Patsiouras, H., Moritz, R., Simpson, R., Houle, B., Laboissiere, S., Metalnikov, P., Nguyen, V., Pawson, T., Wong, C. C., Cociorva, D., Yates 3rd, J. R., Ellison, M. J., Lopez-Campistrous, A., Semchuk, P., Wang, Y., Ping, P., Elia, G., Dunn, M. J., Wynne, K., Walker, A. K., Strahler, J. R., Andrews, P. C., Hood, B. L., Bigbee W. L., Conrads T. P., Smith, D., Borchers, C. H., Lajoie, G. A., Bendall, S. C., Speicher K. D., Speicher D. W., Chung, M. A. S., Miller C. A., Grimm, R., Williams, K., Dorschel, C., Falkner, J. A., Martens, L., Vizcaino, J. A., A HUPO Test Sample Study Reveals Common Problems in Mass Spectrometry-Based Proteomics, Nature Methods, 2009, 6, 423-30.
15. Holinger, E. P., Old, W. M., Giddings, T. H. Jr., Wong, C. C., Yates 3rd, J. R., and Winey, M., Budding Yeast Centrosome Duplication Requires Stabilization of Spc29 via Mps1-Mediated Phosphorylation, J Biol Chem., 2009, 284, 12949-55.
16. Xu, S.*, Wong, C. C.* (co-first Author), Tong, E. H., Chung, S. S., Yates 3rd, J. R., Yin, Y., and Ko, B. C., Phosphorylation by Casein Kinase 1 Regulates Tonicity-induced Osmotic Response Element-binding Protein/tonicity Enhancer-binding Protein Nucleocytoplasmic Trafficking, J Biol Chem., 2008, 283, 17624-34.
17. Rai, R., Wong, C. C., Xu, T., Leu, N. A., Dong, D. W., Guo C., McLaughlin, K. J., Yates 3rd, J. R., and Kashina, A., Arginyltransferase Regulates Alpha Cardiac Actin Function, Myofibril Formation and Contractility During Heart Development, Development, 2008, 135, 2881-9.
18. Wong, C. C.*, Xu, T.*,(co-first Author) Rai, R., Bailey, A. O., Yates 3rd, J. R., Wolf, Y. I., Zebroski, H., and Kashina, A., Global Analysis of Posttranslational Protein Arginylation, PLoS Biol., 2007, 5, 2231-42.
19. Rexroth, S., Wong, C. C., Park, J. H., Yates 3rd, J. R., and Barry, B. A., An Activated Glutamate Residue Identified in Photosystem II at the Interface Between the Manganese-stabilizing Subunit and the D2 Polypeptide, J Biol Chem., 2007, 282, 27802-9.
20. Liao, L., Pilotte, J., Xu, T., Wong, C. C., Edelman, G. M., Vanderklish, P., and Yates 3rd, J. R., BDNF Induces Widespread Changes in Synaptic Protein Content and Up-regulates Components of the Translation Machinery: An Analysis Using High-throughput Proteomics, J Proteome Res., 2007, 6, 1059-71.
K21. arakozova, M., Kozak, M., Wong, C. C., Bailey, A. O., Yates 3rd, J. R., Mogilner, A., Zebroski, H., and Kashina, A., Arginylation of Beta-actin Regulates Actin Cytoskeleton and Cell Motility, Science, 2006, 313, 192-6.
22. Abirami, S., Wong, C. C., Tsang, C. W., and Ma, N. L., Dissociation of Alkaliated Alanine in the Gas Phase: the Role of the Metal Cation, Chem Eur J., 2005, 11, 5289-301.


333 Haike Road, Pudong District,
201210, Shanghai, P.R.China
Tel: 021-20778500